Package index • BCAIA

Model fitting

bcaia(): Bayesian covariate-varying interaction analysis for multivariate counts
bcaia_control(): Hyperparameter and MCMC control settings for bcaia

Posterior summaries

posterior_Sigma(): Posterior covariate-varying covariance matrix
posterior_cor(): Posterior covariate-varying correlation matrix
posterior_cor_pair(): Posterior interval for a scalar quantity across covariate settings
choose_K(): Empirically choose the number of latent factors K

Data and simulation

simulate_bcaia(): Simulate data from the covariate-varying interaction model (Simulation 1)
mice: Mice gut microbiome data (Patnode et al. 2019)